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Banerjee Lab at UIUC

Welcome to Banerjee Lab | Food Safety & Microbiology | Microbial Genomics

REFEREED PUBLICATIONS

Journal Articles

Name underlined = Student advisee or post-doctoral scholar; * = Corresponding/senior author; full texts may be retrieved by clicking the DOI hyperlinks or by sending a request to Dr. Banerjee.

Sulaiman IM*, Miranda N, Hook W, Mendoza J, Kumfert Q, Barnes T, Sung K, Khan S, Nawaz M, Banerjee P, Simpson S, Karem K. A Single-laboratory Performance Evaluation of MALDI-TOF MS in Rapid Identification of Staphylococcus aureus, Cronobacter sakazakii, Vibrio parahaemolyticus, and Some Closely Related Bacterial Species of Public Health Importance. J AOAC Int. 2023; (in press). DOI: 10.1093/jaoacint/qsad109
Banerjee G*, Papri SR, Satapathy SK*, Banerjee P*. Akkermansia muciniphila - a Potential Next-generation Probiotic for Non-alcoholic Fatty Liver Disease. Curr Pharm Biotechnol. 2023; (in press). DOI: 10.2174/1389201025666230915103052
Nath J, De J, Sur S, Banerjee P*. Interaction of Microbes with Microplastics and Nanoplastics in the Agroecosystems—Impact on Antimicrobial Resistance. Pathogens. 2023. 12(7), p. 1888. DOI: 10.3390/pathogens12070888
Chauhan BV, Higgins Jones D, Banerjee G, Agarwal S, Sulaiman IM, Jia C, Banerjee P*. Indoor Bacterial and Fungal Burden in “Moldy” versus “Non-Moldy” Homes: A Case Study Employing Advanced Sequencing Techniques in a US Metropolitan Area. Pathogens. 2023. 12(8), p. 1006. DOI: 10.3390/pathogens12081006
Adhikari A, Banerjee P, Thornton T, Jones DH, Adeoye C, Sherpa S. Exposure Levels of Airborne Fungi, Bacteria, and Antibiotic Resistance Genes in Cotton Farms during Cotton Harvesting and Evaluations of N95 Respirators against These Bioaerosols. Microorganisms. 2023. 11(6): p.1561. DOI: 10.3390/microorganisms11061561
Banerjee G, Agarwal S, Marshall A, Jones DH, Sulaiman IM, Sur S, Banerjee P*. Application of advanced genomic tools in food safety rapid diagnostics: challenges and opportunities. Curr Opin Food Sci. 2022; 47: p.100886. DOI: 10.1016/j.cofs.2022.100886
Banerjee G, Quan FS, Mondal AK, Sur S, Banerjee P*, Chattopadhyay P*. Interrelation between Stress Management and Secretion Systems of Ralstonia solanacearum: An in silico Assessment. Pathogens. 2022; 11(7), p.730. DOI: 10.3390/pathogens11070730
Banerjee G, Shokeen K, Chakraborty N, Agarwal S, Mitra A*, Kumar S*, Banerjee P*. Modulation of immune response in Ebola virus disease. Curr Opin Pharmacol. 2021; 60:158-167. DOI: 10.1016/j.coph.2021.07.004
Han L, Kaushal A, Zhang H*, Kadalayil L, Duan J, Holloway JW, Karmaus W, Banerjee P, Tsai SF, Wen HJ, Arshad SH, Wang SL*. DNA Methylation at birth is associated with childhood serum Immunoglobulin E levels. Epigenet Insights. 2021; 14:1-9. DOI: 10.1177/25168657211008
Satapathy SK*, Banerjee P, Pierre JF, Higgins D, Dutta S, Heda R, Khan SD, Mupparaju VK, Mas V, Nair S, Eason JD, Kleiner DE, Maluf DG. Characterization of Gut Microbiome in Liver Transplant Recipients with Nonalcoholic Steatohepatitis. Transplant Direct. 2020; 6(12):e625. DOI: 10.1097/TXD.0000000000001033
Higgins D, Mukherjee N, Pal C, Sulaiman IM, Jiang Y, Hanna S, Dunn JR, Karmaus W, Banerjee P*. Association of virulence and antibiotic resistance in Salmonella —statistical and computational insights into a selected set of clinical isolates. Microorganisms. 2020; 8(10), 1465. DOI:10.3390/microorganisms8101465
Higgins D, Karmaus W*, Jiang Y, Banerjee P, Sulaiman IM, Arshad HS. Infant wheezing and prenatal antibiotic exposure and mode of delivery: a prospective birth cohort study. J Asthma. 2020;1-12. DOI: 10.1080/02770903.2020.1734023
Mukherjee N, Nolan VG, Dunn JR, Banerjee P*. Exposures Associated with Non-Typhoidal Salmonella Infections Caused by Newport, Javiana, and Mississippi Serotypes in Tennessee, 2013–2015: A Case-Case Analysis. Pathogens. 2020, 9(2), 78. DOI: 10.3390/pathogens9020078
Syed I, Banerjee P, Sarkar P*. Oil-in-water emulsions of geraniol and carvacrol improve the antibacterial activity of these compounds on raw meat surface during extended storage. Food Control. 2020; 107(106757). DOI: 10.1016/j.foodcont.2019.106757
Mukherjee N, Nolan VG, Dunn JR, Banerjee P*. Sources of human infection by Salmonella enterica serotype Javiana: A systematic review. PLoS One. 2019; 14(9): e0222108. DOI: 10.1371/journal.pone.0222108
Kaur H, Nyochembeng LM*, Banerjee P, Cebert E, Mentreddy SR, Optimization of fermentation conditions of Lentinula edodes (Berk.) Pegler (Shiitake mushroom) mycelia as a potential biopesticide. J Agric Sci. 2019; 11(13): 1-10. DOI: 10.5539/jas.v11n13p1
Kovalic AJ, Banerjee P, Tran QT, Singal AK, Satapathy SK*. Genetic and epigenetic culprits in the pathogenesis of nonalcoholic fatty liver disease. J Clin Exp Hepatol. 2018; 8(4): 390-402. DOI: 10.1016/j.jceh.2018.04.001
Higgins D, Pal C, Sulaiman IM, Jia C, Zerwekh JT, Dowd SE, Banerjee P*, Application of high-throughput pyrosequencing in the analysis of microbiota of food commodities procured from small and large retail outlets in a U.S. metropolitan area – A pilot study. Food Res Int. 2018; 105: 29-40. DOI: 10.1016/j.foodres.2017.10.057
Sulaiman IM*, Banerjee P, Hsieh YH, Miranda N, Simpson S, Kerdahi K. Rapid detection of Staphylococcus aureus and related species isolated from food, environment, cosmetics, medical device, and clinical samples using VITEK MS microbial identification system. J AOAC Int. 2018; 101(4): 1135-1143. DOI: 10.5740/jaoacint.17-0284
Adhikari A*, Kurella S, Banerjee P, Mitra A. Aerosolized bacteria and microbial activity in dental clinics during cleaning procedures. J Aerosol Sci. 2017;114: 209-218. DOI: 10.1016/j.jaerosci.2017.09.019
Banerjee P*, Sulaiman IM, Schneider G, Ray U, Jagadeesan B. Novel Microbial Diagnostic Methods for Clinical, Environmental, and Food Samples. Biomed Res Int. 2017; 2017:3942801. DOI: 10.1155/2017/3942801
Miranda N, Banerjee P, Simpson S, Kerdahi K. Sulaiman IM*. Molecular surveillance of Cronobacter spp. isolated from a wide varieties of foods from 44 different countries by sequence typing of 16S rRNA, rpoB and O-antigen genes. Foods. 2017; 6(5), 35:E36. DOI: 10.3390/foods6050036
Mukherjee N, Patra C, Dowd SE, Chauhan BV , Bartelli D, Banerjee P*. Microbial diversity of source and point-of-use water in rural Haiti – a pyrosequencing-based metagenomic survey. PLoS One. 2016; 11(12):e0167353. DOI: 10.1371/journal.pone.0167353
Mukherjee N, Sulaiman IM, Banerjee P*. Characterization of methicillin-resistant Staphylococcus aureus isolates from fitness centers in the Memphis metropolitan area, Tennessee. Am J Infect Control. 2016;44(12): 1681–1683. DOI: 10.1101/061044
Kaur H*, Nyochembeng LM., Mentreddy SR, Banerjee P, Cebert E. Assessment of the antimicrobial activity of Lentinula edodes against Xanthomonas campestris pv. vesicatoria. Crop Prot. 2016;89: 284-288. DOI: 10.1016/j.cropro.2016.08.001
Kennedy NM, Mukherjee M, Banerjee P*. Escherichia coli O157:H7 Cells Exposed to Lettuce Leaf Lysates in Refrigerated Conditions Exhibit Differential Expression of Selected Virulence and Adhesion-related Genes with Altered Mammalian Cell Adherence. J Food Prot. 2016;79(7): 1259-1265. DOI: 10.4315/0362-028x.jfp-15-504
Montgomery NL, Banerjee P*. Inactivation of Escherichia coli O157:H7 and Listeria monocytogenes in biofilms by pulsed ultraviolet light. BMC Res Notes. 2015; 8:235. DOI: 10.1186/s13104-015-1206-9
Mukherjee N, Dowd SE, Wise A, Kedia S, Vohra V, Banerjee P*. Diversity of bacterial communities of fitness center surfaces in a U.S. metropolitan area. Int J Environ Res Public Health. 2014; 11(12): 12544–61. DOI: 10.3390/ijerph111212544
Najafi R, Mukherjee S, Hudson J, Sharma A, Banerjee P*. Development of a rapid capture-cum-detection method for Escherichia coli O157 from apple juice comprising nano-immunomagnetic separation in tandem with surface enhanced Raman scattering. Int J Food Microbiol. 2014;189:89–97. DOI: 10.1016/j.ijfoodmicro.2014.07.036
Banerjee P*, Kintzios S, Prabhakarpandian B. Biotoxin detection using cell-based sensors. Toxins. 2013;5(12):2366–83. DOI: 10.3390/toxins5122366
Banerjee P, Bhunia AK*. Cell-based biosensor for rapid screening of pathogens and toxins. Biosens Bioelectron. 2010;26(1):99–106. DOI: 10.1016/j.bios.2010.05.020
Bueno VF, Banerjee P, Banada PP, José de Mesquita A, Lemes-Marques EG, Bhunia AK*. Characterization of Listeria monocytogenes isolates of food and human origins from Brazil using molecular typing procedures and in vitro cell culture assays. Int J Environ Health Res. 2010;20(1):43–59. DOI: 10.1080/09603120903281283
Banerjee P, Franz B, Bhunia AK*. Mammalian cell-based sensor system. Adv Biochem Eng Biotechnol. 2010;117:21–55. DOI: 10.1007/10_2009_21
Banerjee P*, Merkel GJ, Bhunia AK. Lactobacillus delbrueckii ssp. bulgaricus B-30892 can inhibit cytotoxic effects and adhesion of pathogenic Clostridium difficile to Caco-2 cells. Gut Pathog. 2009;1(1):8. DOI: 10.1186/1757-4749-1-8
Banerjee P, Bhunia AK*. Mammalian cell-based biosensors for pathogens and toxins. Trends Biotechnol. 2009;27(3):179–88. DOI: 10.1016/j.tibtech.2008.11.006
Banerjee P, Lenz D, Robinson JP, Rickus JL, Bhunia AK*. A novel and simple cell-based detection system with a collagen-encapsulated B-lymphocyte cell line as a biosensor for rapid detection of pathogens and toxins. Lab Invest. 2008;88(2):196–206. DOI: 10.1038/labinvest.3700703
Banerjee P, Morgan MT, Rickus JL, Ragheb K, Corvalan C, Robinson JP, Bhunia AK*. Hybridoma Ped-2E9 cells cultured under modified conditions can sensitively detect Listeria monocytogenes and Bacillus cereus. Appl Microbiol Biotechnol. 2007;73(6):1423–34. DOI: 10.1007/s00253-006-0622-0
Bhunia AK*, Banada P, Banerjee P, Valadez A, Hirleman ED. Light scattering, fiber optic- and cell-based sensors for sensitive detection of foodborne pathogens. J Rapid Methods Autom Microbiol. 2007;15(2):121–45. DOI: 10.1111/j.1745-4581.2007.00077.x
Banerjee P, Banada PP, Rickus JL, Morgan MT, Bhunia AK*. A portable cell-based optical detection device for rapid detection of Listeria and Bacillus toxins. Proc SPIE. 2005; 5996:5996021-5996027. DOI: 10.1117/12.630793
Mukherjee B*, Patra B, Mahapatra S, Banerjee P, Tiwari A, Chatterjee M. Vanadium--an element of atypical biological significance. Toxicol Lett. 2004 Apr 21;150(2):135–43. DOI: 10.1016/j.toxlet.2004.01.009
Banerjee P, Chatterjee M*. Antiproliferative role of vitamin D and its analogs--a brief overview. Mol Cell Biochem. 2003;253(1-2):247–54. DOI: 10.1023/a:1026072118217
Chakraborty K, Khan GA, Banerjee P, Ray U, Sinha AK*. Inhibition of human blood platelet aggregation and the stimulation of nitric oxide synthesis by aspirin. Platelets. 2003;14(7-8):421–7. DOI: 10.1080/095371032000158763
Kanna P-S, Mahendrakumar CB, Chakraborty T, Hemalatha P, Banerjee P, Chatterjee M*. Effect of vanadium on colonic aberrant crypt foci induced in rats by 1,2 dimethyl hydrazine. World J Gastroenterol. 2003 May;9(5):1020–7. DOI: 10.3748/wjg.v9.i5.1020

Book Chapters

To C, Banerjee P, Bhunia AK*, 2020. Cell-Based Biosensor for Rapid Screening of Pathogens and Toxins, in: Thouand G. (Ed.) Handbook of Cell Biosensors, Springer International Publishing, pp. 1-16. DOI: 10.1007/978-3-319-47405-2_102-1
Sarkar P, Panigrahi SS, Nayak A, Prasad K, Roy E, Banerjee P*, 2017. Nanosensors in food safety, in: Kintzios S. (Ed.), Portable Biosensors and Point-of-Care Systems, The Institution of Engineering and Technology (IET) Publishing, Stevenage, SG1 2AY, United Kingdom. pp. 183–207. DOI: 10.1049/pbhe003e_ch10
Kintzios S, Banerjee P*, 2015. Mammalian cell-based sensors for high throughput screening for detecting chemical residues, pathogens, and toxins in food, in: Bhunia AK, Kim MS, Taitt CR (Eds.), High Throughput Screening for Food Safety Assessment, Woodhead Publishing Series in Food Science, Technology and Nutrition. Woodhead Publishing (Elsevier imprint), pp. 123–146. DOI: 10.1016/B978-0-85709-801-6.00005-8